Deal with PermissionError when setting up the working_dir #30226
Workflow file for this run
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| name: Mulled Unit Tests | |
| on: | |
| push: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| - 'packages/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| - 'packages/**' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: Test | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.10'] | |
| steps: | |
| - uses: actions/checkout@v6 | |
| with: | |
| path: 'galaxy root' | |
| persist-credentials: false | |
| - uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install uv | |
| uses: astral-sh/setup-uv@v7 | |
| - name: Get full Python version | |
| id: full-python-version | |
| shell: bash | |
| run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | |
| - name: Install Apptainer's singularity | |
| uses: eWaterCycle/setup-apptainer@v2 | |
| - name: Install tox | |
| run: uv tool install tox --with tox-uv | |
| - name: Run tests | |
| run: tox -e mulled | |
| working-directory: 'galaxy root' | |
| - uses: actions/upload-artifact@v6 | |
| if: failure() | |
| with: | |
| name: Mulled unit test results (${{ matrix.python-version }}) | |
| path: 'galaxy root/run_unit_tests.html' |