Skip to content

Add test for loadOme with fixtures (#942) #112

Add test for loadOme with fixtures (#942)

Add test for loadOme with fixtures (#942) #112

Workflow file for this run

name: Release
on:
push:
branches:
- main
concurrency: ${{ github.workflow }}-${{ github.ref }}
permissions:
id-token: write # Required for OIDC trusted publishing via NPM and GitHub Actions
# Need read/write contents and PRs in order for "changesets version" to open a "Create release" PR.
contents: write
pull-requests: write
jobs:
release:
name: Release
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v3
with:
node-version: 20.17.0 # required for OIDC publishing
registry-url: https://registry.npmjs.org/
# npm 11.5.1 or later is required for OIDC publishing, so update to latest to be sure
- run: npm install -g npm@latest
- uses: pnpm/action-setup@v4
with:
run_install: true
- name: Create Release Pull Request or Publish to npm
id: changesets
uses: changesets/action@v1
with:
title: Create Release
version: pnpm run version
publish: pnpm run publish --provenance
createGithubReleases: false
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
- name: Upload Avivator to S3
# Make an Avivator Release if we published something to NPM
if: steps.changesets.outputs.published == 'true'
env:
AWS_DEFAULT_REGION: us-east-1
AWS_ACCESS_KEY_ID: ${{ secrets.VIV_S3_ACCESS_KEY_ID }}
AWS_SECRET_ACCESS_KEY: ${{ secrets.VIV_S3_ACCESS_KEY_SECRET }}
run: |
aws s3 cp --recursive sites/avivator/dist s3://avivator.gehlenborglab.org
aws s3 cp --recursive sites/docs/dist s3://viv.gehlenborglab.org
aws cloudfront create-invalidation --distribution-id E204VEQ9XF37EF --paths "/*"
- name: "Delete redundant @vivjs/* tags and releases"
# We have "fixed" the versioning for all @vivjs packages,
# meaning all packages get the same changes. This creates
# a lot of noise when making releases since every package
# gets a separate tag and release from changesets.
#
# We could maybe write our own action rather than use actions/changesets
# but this way is easier.
if: steps.changesets.outputs.published == 'true'
run: |
# Delete @vivjs releases
gh release list --repo hms-dbmi/viv \
| grep '^@vivjs' \
| awk '{print $1}' \
| xargs -I {} gh release delete {} --repo hms-dbmi/viv -y
# Delete @vivjs tags
gh api /repos/hms-dbmi/viv/git/refs/tags \
| jq -r '.[].ref' \
| grep '^refs/tags/@vivjs' \
| sed 's#refs/tags/##' \
| xargs -I {} gh api -X DELETE /repos/hms-dbmi/viv/git/refs/tags/{}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}