fix failing pytest for lint after samtools topic conversion

[mashehu]

decided to comment out the counting until we have converted all modules, so we don't need to come back to this every time one changes

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.10%. Comparing base (6597f82) to head (9542f29).

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[mirpedrol]

Let's add a TODO comment to add this line back with the correct counting once all modules add converted.
Apart form this LGTM!