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    • qMRI multivariate SPM, age effect analysis code
      MATLAB
      0000Updated Feb 7, 2026Feb 7, 2026
    • bidsme

      Public
      Flexible bidsificator for multimodal datasets
      Python
      21330Updated Jan 28, 2026Jan 28, 2026
    • Personalized detection of subtle white-matter abnormalities
      Python
      0000Updated Jan 22, 2026Jan 22, 2026
    • Python & Matlab implementation of the MPRAGElike approach to compute pseudo T1w MPRAGE images from multi-contrast GRE images.
      MATLAB
      1000Updated Dec 15, 2025Dec 15, 2025
    • Tissue weighted smoothing little demo
      MATLAB
      0000Updated Oct 28, 2025Oct 28, 2025
    • A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
      MATLAB
      44000Updated Aug 25, 2025Aug 25, 2025
    • Bringing BIDSme into a container, then NeuroDesk
      Jupyter Notebook
      0000Updated Aug 25, 2025Aug 25, 2025
    • MRSI_reco

      Public
      Python
      0100Updated Jul 2, 2025Jul 2, 2025
    • Code associated with our ESMRMB2025 abstract on Lumbar Nerve Roots (LNR) diffusion tensor MRI (DTI).
      Python
      0000Updated Jun 4, 2025Jun 4, 2025
    • MATLAB
      0000Updated Jun 3, 2025Jun 3, 2025
    • Code associated with our ESMRMB2025 abstract on classifying ADNI data (1.5T and 3T MRI)
      Python
      0000Updated Jun 3, 2025Jun 3, 2025
    • Code associated with our ESMRMB2025 abstract on Contrast Adjustment for MR Images at 7T
      MATLAB
      0000Updated May 27, 2025May 27, 2025
    • Template notebooks for bidsification with bidsme
      Jupyter Notebook
      0000Updated Apr 23, 2025Apr 23, 2025
    • mpm_bids

      Public
      MATLAB
      0100Updated Mar 5, 2025Mar 5, 2025
    • spm

      Public
      SPM (Statistical Parametric Mapping) 25 - Development Version
      MATLAB
      49000Updated Feb 22, 2025Feb 22, 2025
    • USwLesion

      Public
      Unified Segmentation for lesioned brain
      MATLAB
      5380Updated Jan 30, 2025Jan 30, 2025
    • BIDSification of aging paper's processed data (Callaghan 2014) for public release
      MATLAB
      0020Updated Jan 16, 2025Jan 16, 2025
    • Python-based open source package for actigraphy data analysis
      Python
      32000Updated Aug 28, 2024Aug 28, 2024
    • Visual QC for MPM data
      MATLAB
      0000Updated Jul 19, 2024Jul 19, 2024
    • PETpro

      Public
      Automated pipeline to quantify bidsified PET dataset using Logan plot model
      MATLAB
      0100Updated Jul 4, 2024Jul 4, 2024
    • Brain Imaging Data Structure (BIDS) Specification
      Python
      193000Updated Apr 12, 2024Apr 12, 2024
    • Singularity containerized version of the NODDI toolbox.
      MATLAB
      1800Updated Mar 26, 2024Mar 26, 2024
    • shamo

      Public
      A tool for electromagnetic modelling of the head and sensitivity analysis.
      Python
      1701Updated Mar 20, 2024Mar 20, 2024
    • OHBM2024 Educational Course, Integrating multimodal data with multivariate and machine learning approaches.
      0000Updated Nov 28, 2023Nov 28, 2023
    • A set of tutorials for Bidsme usage
      Jupyter Notebook
      0000Updated Nov 22, 2023Nov 22, 2023
    • Testing some functions and features from the hMRI toolbox
      MATLAB
      0100Updated Oct 17, 2023Oct 17, 2023
    • Bits of code to BIDS-ify the example data set from the hMRI toolbox
      MATLAB
      1051Updated Sep 15, 2023Sep 15, 2023
    • Example datasets for bidsme tool
      Python
      0000Updated Aug 7, 2023Aug 7, 2023
    • Redirecting SPM toolbox to another folder.
      MATLAB
      0000Updated May 16, 2023May 16, 2023
    • FASST

      Public
      FASST, aka. fMRI Artefact rejection and Sleep Scoring Toolbox, public distribution with the latest updates.
      MATLAB
      182041Updated Mar 5, 2023Mar 5, 2023