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Plugins configuration is not merged when passing configs via the CLI

Status: Open.

#6754 In nextflow-io/nextflow;

· dvmcconnell opened on Jan 23, 2026

Allow the use of SLURM clusters which forbid --mem and --mem-per-cpu options

executor/slurm

Status: Open.

#6751 In nextflow-io/nextflow;

· phupe opened on Jan 23, 2026

Strict syntax: config profiles get overwritten when a custom config is given

lang/config

Status: Open.

#6748 In nextflow-io/nextflow;

· nvnieuwk opened on Jan 22, 2026

PublishOp fails with empty value channel from collect() on empty process output

lang/dataflow

Status: Open.

#6745 In nextflow-io/nextflow;

· pinin4fjords opened on Jan 21, 2026

<code>cpus</code> trace value does not correspond to used logical cores of the task

Status: Open.

#6743 In nextflow-io/nextflow;

· JosuaCarl opened on Jan 21, 2026

# Bug Report: Nextflow hangs indefinitely - without error - when invoking invalid operators on path objects

Status: Open.

#6739 In nextflow-io/nextflow;

· mikesivley opened on Jan 20, 2026

<code>nextflow launch</code> validate parameters prior to running pipeline

Status: Open.

#6738 In nextflow-io/nextflow;

· adamrtalbot opened on Jan 20, 2026

errorStrategy "skip"

lang/processes

Status: Open.

#6711 In nextflow-io/nextflow;

· ColinL1 opened on Jan 12, 2026

<code>%cpu</code> / <code>cpus</code> &gt; 100%

Status: Open.

#6710 In nextflow-io/nextflow;

· JosuaCarl opened on Jan 12, 2026

Azure nodes keep becoming unusable due to lack of space when using Docker images to run jobs on Azure

executor/azure-batch

Status: Open.

#6708 In nextflow-io/nextflow;

· pwaltman opened on Jan 9, 2026

Expand <code>.splitCsv()</code> to allow comments in CSV and TSV files

good first issue

Status: Open.

#6705 In nextflow-io/nextflow;

· nvnieuwk opened on Jan 8, 2026

TraceObserverV2 - onFlowComplete firing twice when a process was retried

bug

Status: Open.

#6692 In nextflow-io/nextflow;

· doupnika-roche opened on Dec 30, 2025